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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005852.1_300_481_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

300 - 481

Intron Length:

182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGGCAG

5'SS Class:

major

3'SS Sequence:

GCTCTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAA

U12 Branch Point Sequence:

CCGGGGTGAAGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.5

0.3

1.4

51.4

Major BPS

45.7

-0.2

1.4

34.8

43.8

Major PPT

72.3

0.5

0.8

65.6

30.3

Minor 5ss

24.1

-3

3.2

43.5

Minor BPS

31.9

-1.4

2.3

33.56

42.2

Associated Gene:

Gene:

SNCB

Ensembl Gene ID:

ENSAPLG00000017857

Chromosome:

PEDO01005852.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041338

21 - 2623

2603