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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005885.1_310_455_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

310 - 455

Intron Length:

146

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCACCCCAG

5'SS Class:

weak_major

3'SS Sequence:

GGGGGGTGCTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

GTGGTGACACTC

Flanking Amino Acid:

WPKTCVGSALGVSPTQALLI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.9

0.12

1.4

38.7

46.4

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

40.6

-0.5

1.7

34.3

45.4

Minor 5ss

30.9

-2.2

4.2

37.9

Minor BPS

-1.5

2.1

34.96

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016957

Chromosome:

PEDO01005885.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036903

51 - 2081

2031