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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005890.1_123_214_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123 - 214

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

GCCTGCCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCCCAT

U12 Branch Point Sequence:

CCTGCCTTACAG

Flanking Amino Acid:

DAVAHPLVLEAVHEIILSNR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

47.9

-0.1

1.3

55.8

41.7

Major PPT

72.7

0.51

0.9

64.3

36.8

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

-0.2

1.9

51.73

48.5

Associated Gene:

Gene:

NME6

Ensembl Gene ID:

ENSAPLG00000009073

Chromosome:

PEDO01005890.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009431

33 - 1500

1468