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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005918.1_468_1077_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

468 - 1077

Intron Length:

610

Sequence Information:

Terminal Dinucleotides:

GT-TG

5'SS Sequence:

GGG|GTAGCTACG

5'SS Class:

major

3'SS Sequence:

AGCGCTGCCAGTG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCAGAT

U12 Branch Point Sequence:

TGCAGATCACCT

Flanking Amino Acid:

GDTVQITCSGDGKYWYGWYQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.5

0.29

1.3

57.2

47.5

Major BPS

58.9

0.22

1.2

54.7

43.1

Major PPT

-1.3

3.2

34.1

35.4

Minor 5ss

39.8

-1.1

2.9

43.1

44.1

Minor BPS

38.1

-0.8

2.2

54.87

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029861

Chromosome:

PEDO01005918.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045886

21 - 1816

1796