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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005921.1_339_424_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

339 - 424

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTTGATCGG

5'SS Class:

weak_major

3'SS Sequence:

CAGCCCGGAGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGTTGAT

U12 Branch Point Sequence:

TTGATTTCAGCC

Flanking Amino Acid:

IGSSSKGSHGEAELLEVKVK

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.8

0.02

1.3

39.9

Major BPS

72.4

0.56

1.1

63.1

44.4

Major PPT

41.1

-0.5

1.6

35.5

34.8

Minor 5ss

27.5

-2.6

2.9

24.4

Minor BPS

-0.2

1.7

58.67

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013678

Chromosome:

PEDO01005921.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014241

174 - 962

789