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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005933.1_6263_6355_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6263 - 6355

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCCCAT

U12 Branch Point Sequence:

CCCCCCCCACTT

Flanking Amino Acid:

SVIAWGLSLERPTMIKYGIN

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

68.8

Major BPS

46.8

-0.2

1.4

54.3

42.9

Major PPT

85.3

0.79

0.7

79.9

25.4

Minor 5ss

27.1

-2.6

31.8

42.6

Minor BPS

39.4

-0.7

49.68

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026183

Chromosome:

PEDO01005933.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025957

6097 - 7986

1890