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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005957.1_2695_2790_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2695 - 2790

Intron Length:
96

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGGGGAGC

5'SS Class:
major

3'SS Sequence:
GCTGTCCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGGTGAC

U12 Branch Point Sequence:
GGTGCCGCAGGG

Flanking Amino Acid:
GDKGNEENPHRFDLLIRTQR

Intron Amino Acid Position:
386

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1
63.9
42.4

Major BPS
45.4
-0.2
1.4
34.5
43.7

Major PPT
69.3
0.43
0.9
62
34.8

Minor 5ss
25.8
-2.8
3.2
33.4
42.1

Minor BPS
33.5
-1.3
2.3
36.89
44.9

Associated Gene:

Gene:
B4GALT3

Ensembl Gene ID:

Chromosome:
PEDO01005957.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1268 - 4212
2945