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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005957.1_3199_3283_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3199 - 3283

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

GGTGTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

CCTGGCTCAGCC

Flanking Amino Acid:

VSVAMNKFGYNLPYSQYFGG

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

35.3

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

66.5

0.37

0.9

58.7

38.3

Minor 5ss

36.1

-1.6

3.3

49.5

41.2

Minor BPS

41.6

-0.6

2.2

49.78

46.8

Associated Gene:

Gene:

B4GALT3

Ensembl Gene ID:

ENSAPLG00000018352

Chromosome:

PEDO01005957.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037682

1268 - 4212

2945