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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005960.1_1430_1536_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1430 - 1536

Intron Length:
107

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAAGTGA

5'SS Class:
major

3'SS Sequence:
GGTCTGTTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTAAT

U12 Branch Point Sequence:
CTAATCTGAATT

Flanking Amino Acid:
LCIRRNVRQPASAKWYD

Intron Amino Acid Position:
8

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.8
0.7
1
69
38.3

Major BPS
81.9
0.79
0.9
80.1
30

Major PPT
76
0.59
1
68.8
41.9

Minor 5ss
35.4
-1.7
3.3
47.1
48.3

Minor BPS
56.9
0.29
1.5
70.05
41

Associated Gene:

Gene:
PTGES3

Ensembl Gene ID:

Chromosome:
PEDO01005960.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1305 - 5395
4091