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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005986.1_1502_1751_F

Intron Information:

Intron Rank:

125785

Intron Class:

major

Intron Phase:

Intron Coordinates:

1502 - 1751

Intron Length:

250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

GCTGCTTCAGCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

80.1

30.7

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

91.7

0.94

0.6

87.8

22.3

Minor 5ss

40.1

-1.1

3.1

49.2

Minor BPS

46.4

-0.2

1.8

54.91

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017745

Chromosome:

PEDO01005986.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037278

348 - 1912

1565