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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005990.1_5632_8791_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5632 - 8791

Intron Length:

3160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGCAT

5'SS Class:

major

3'SS Sequence:

TGTTTTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTTTTGTATCC

Flanking Amino Acid:

LDPVKVTCLREFIRMHCTSN

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

62.6

43.3

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

86.8

0.83

0.7

81.7

30.4

Minor 5ss

31.4

-2.1

3.6

47.4

Minor BPS

51.6

0.03

2.2

73.08

38.7

Associated Gene:

Gene:

BEND4

Ensembl Gene ID:

ENSAPLG00000008421

Chromosome:

PEDO01005990.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008741

364 - 25213

24850

ENSAPLT00000032651

3297 - 25213

21917