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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005998.1_218_1594_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

218 - 1594

Intron Length:

1377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGCCCAAG

5'SS Class:

weak_major

3'SS Sequence:

TCTCTTTTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCCAAC

U12 Branch Point Sequence:

CCTCCTCCAACA

Flanking Amino Acid:

QGARSPSLAPSEVIPIFAEI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.8

0.04

1.2

49.7

42.9

Major BPS

49.8

-0

1.2

34.3

Major PPT

81.8

0.72

0.9

79.9

32.1

Minor 5ss

39.5

-1.2

3.1

47.5

42.8

Minor BPS

46.7

-0.2

1.9

57.53

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030665

Chromosome:

PEDO01005998.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019321

145 - 1854

1710