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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006020.1_20827_21035_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20827 - 21035

Intron Length:

209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAATA

5'SS Class:

strong_major

3'SS Sequence:

GCTTCCTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

TCGTTTGTGACC

Flanking Amino Acid:

KKSRKRDSQDRRKSLFKKIS

Intron Amino Acid Position:

1082

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.7

85.9

23.8

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

65.9

0.36

63.5

37.2

Minor 5ss

31.6

-2.1

39.7

45.8

Minor BPS

48.2

-0.1

59.85

40.6

Associated Gene:

Gene:

MAST3

Ensembl Gene ID:

ENSAPLG00000012366

Chromosome:

PEDO01006020.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036644

19622 - 31544

11923

ENSAPLT00000012914

19622 - 64005

44384