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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006020.1_24138_24237_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24138 - 24237

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAGGG

5'SS Class:

major

3'SS Sequence:

GGTTCTAACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

CTGGTTCTAACG

Flanking Amino Acid:

KDTREFMDKQVCGTPEYIAP

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.68

44.1

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

65.4

0.35

59.3

40.8

Minor 5ss

28.8

-2.4

3.4

38.5

46.5

Minor BPS

46.7

-0.3

1.8

50.52

44.4

Associated Gene:

Gene:

MAST3

Ensembl Gene ID:

ENSAPLG00000012366

Chromosome:

PEDO01006020.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036644

19622 - 31544

11923

ENSAPLT00000012914

19622 - 64005

44384