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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006020.1_5890_6082_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5890 - 6082

Intron Length:

193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTCG

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GGGTCCTGACTG

Flanking Amino Acid:

LLYPISKYQQDQVVKEDSVE

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

38.1

Major BPS

68.9

0.47

59.2

39.1

Major PPT

62.5

0.28

1.2

57.5

47.4

Minor 5ss

31.6

-2.1

3.2

38.5

46.7

Minor BPS

47.5

-0.3

1.8

49.75

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011675

Chromosome:

PEDO01006020.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012240

873 - 12814

11942