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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006020.1_6264_6434_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6264 - 6434

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

TGGTGATAAACA

Flanking Amino Acid:

KIQGEYTLTLRKGGNNKLIK

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

75.1

35.1

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

81.9

0.72

0.7

76.4

25.6

Minor 5ss

32.4

-2

3.2

42.3

44.8

Minor BPS

-0.3

2.3

61.04

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011675

Chromosome:

PEDO01006020.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012240

873 - 12814

11942