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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006020.1_69657_70002_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69657 - 70002

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGGTAA

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTTTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTTTCTGACAT

Flanking Amino Acid:

MSELFPVHNLEPVAVARPNR

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.9

36.1

Major BPS

87.6

0.93

0.9

89.3

Major PPT

74.6

0.55

41.8

Minor 5ss

34.6

-1.7

3.5

45.7

49.5

Minor BPS

58.3

0.34

1.8

81.8

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016128

Chromosome:

PEDO01006020.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016823

67381 - 71603

4223