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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006020.1_9379_12108_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9379 - 12108

Intron Length:

2730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

CCCTCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

TGGGTCTGACGC

Flanking Amino Acid:

GCRLQEAPEQGSPLPDLQEQ

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

33.4

Major BPS

63.7

0.34

1.2

41.8

Major PPT

73.2

0.52

0.8

64.5

30.9

Minor 5ss

46.5

-0.4

2.8

65.7

45.4

Minor BPS

40.9

-0.7

1.9

46.78

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011675

Chromosome:

PEDO01006020.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012240

873 - 12814

11942