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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006027.1_12077_15536_F

Intron Information:

Intron Rank:

126618

Intron Class:

major

Intron Phase:

Intron Coordinates:

12077 - 15536

Intron Length:

3460

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

TTGACTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

CCTGTTTTGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.8

40.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

83.3

0.75

0.9

80.9

36.6

Minor 5ss

37.3

-1.4

3.1

44.3

44.6

Minor BPS

58.2

0.34

1.4

69.3

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018240

Chromosome:

PEDO01006027.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032731

2114 - 15601

13488