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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006045.1_3483_3588_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
3483 - 3588

Intron Length:
106

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAC|GTGAGCATG

5'SS Class:
major

3'SS Sequence:
CTGGGTTTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATAACAT

U12 Branch Point Sequence:
ATAACATCAGCT

Flanking Amino Acid:
ECRELQRLTNAAASAGDGYR

Intron Amino Acid Position:
210

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.7
0.46
1.3
68.8
43.8

Major BPS
62.2
0.3
1.1
69.4
35.8

Major PPT
75.4
0.57
1
68.6
42

Minor 5ss
38.9
-1.2
3
48
41.4

Minor BPS
45.9
-0.2
2
66.48
43.1

Associated Gene:

Gene:
P3H1

Ensembl Gene ID:

Chromosome:
PEDO01006045.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1214 - 5245
4032