Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006051.1_1874_1953_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1874 - 1953

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCGGT

5'SS Class:

major

3'SS Sequence:

CCGCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCCAC

U12 Branch Point Sequence:

CAGGGCTGAGCC

Flanking Amino Acid:

LAQQHGTHNGAPVLQAASPT

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

63.1

43.4

Major BPS

-0.2

1.4

53.5

Major PPT

66.7

0.38

0.8

57.2

33.3

Minor 5ss

32.2

-2

3.4

38.1

46.8

Minor BPS

-0.7

43.92

43.8

Associated Gene:

Gene:

ANKRD13D

Ensembl Gene ID:

ENSAPLG00000002830

Chromosome:

PEDO01006051.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002858

211 - 3664

3454