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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006051.1_3025_3298_F


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
3025 - 3298

Intron Length:
274

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCG|GTGAGGCTC

5'SS Class:
major

3'SS Sequence:
CGCTGTCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GCCTGAG

U12 Branch Point Sequence:
GTGGCCTGAGCG

Flanking Amino Acid:
ALRRGAAAGAGAAGEPAAAG

Intron Amino Acid Position:
468

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.9
0.61
1
64.2
41.9

Major BPS
44.9
-0.3
1.6
39
42.9

Major PPT
68.2
0.41
0.9
61.2
35.1

Minor 5ss
30.4
-2.2
3.4
42.7
44.4

Minor BPS
47.5
-0.3
1.9
53.1
47.1

Associated Gene:

Gene:
ANKRD13D

Ensembl Gene ID:

Chromosome:
PEDO01006051.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

211 - 3664
3454