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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006077.1_820_1004_F

Intron Information:

Intron Rank:

148286

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

820 - 1004

Intron Length:

185

Sequence Information:

Terminal Dinucleotides:

GT-TG

5'SS Sequence:

ATG|GTGTCATCA

5'SS Class:

weak_major

3'SS Sequence:

TGATGTCATCATG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TATTGCGACACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.6

0.18

1.1

52.8

34.3

Major BPS

0.65

1.1

77.4

37.3

Major PPT

35.2

-0.8

3.1

46.1

45.1

Minor 5ss

44.6

-0.6

2.8

53.9

45.2

Minor BPS

39.3

-0.8

2.8

58.72

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029847

Chromosome:

PEDO01006077.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030045

803 - 1975

1173