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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006083.1_1413_3807_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1413 - 3807

Intron Length:

2395

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAT|GCAGATTTT

5'SS Class:

major

3'SS Sequence:

GTGTAGACATCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTGCAA

U12 Branch Point Sequence:

GGTGTGTAGACA

Flanking Amino Acid:

LHLVLRLRGGIAGLRQLPQR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

40.2

Major BPS

53.2

0.08

1.4

65.6

41.4

Major PPT

57.2

0.16

1.1

53.1

45.6

Minor 5ss

36.2

-1.6

4.4

61.1

44.3

Minor BPS

40.7

-0.7

2.3

50.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017479

Chromosome:

PEDO01006083.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025296

1226 - 4037

2812