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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006099.1_828_891_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

828 - 891

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

AGTCTGCCCAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

ATTTGCTCAAAG

Flanking Amino Acid:

MLLRKRIFAEFSMCFSLWTG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.4

38.7

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

54.6

0.11

1.1

52.5

36.6

Minor 5ss

25.2

-2.9

3.2

43.6

Minor BPS

-0.1

2.1

63.65

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019840

Chromosome:

PEDO01006099.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024398

21 - 1166

1146