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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006104.1_1193_1285_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

1193 - 1285

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCGC

5'SS Class:

major

3'SS Sequence:

TGTCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

GACACCTCACCT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

60.9

40.7

Major BPS

63.6

0.34

65.3

32.1

Major PPT

71.9

0.49

0.8

62.4

34.6

Minor 5ss

29.7

-2.3

3.5

41.4

45.3

Minor BPS

-0

1.9

63.24

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018773

Chromosome:

PEDO01006104.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039027

21 - 3823

3803

ENSAPLT00000032084

193 - 3823

3631