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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006104.1_1725_1818_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1725 - 1818

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTCGG

5'SS Class:

strong_major

3'SS Sequence:

GGCCGTGCCGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACCAAT

U12 Branch Point Sequence:

CCTACACCAATG

Flanking Amino Acid:

PIVPGGYALAGAAAFSGAVT

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

47.6

Major BPS

51.7

0.04

1.2

60.3

34.2

Major PPT

53.5

0.08

0.9

36.6

Minor 5ss

34.1

-1.8

2.9

42.2

44.3

Minor BPS

39.5

-0.9

42.23

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018773

Chromosome:

PEDO01006104.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029671

822 - 3823

3002

ENSAPLT00000039027

21 - 3823

3803

ENSAPLT00000032084

193 - 3823

3631