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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006104.1_3413_3483_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3413 - 3483

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGGCCG

5'SS Class:

strong_major

3'SS Sequence:

CCCGCCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCAAAA

U12 Branch Point Sequence:

CCCCCCTCAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

Major BPS

55.7

0.14

62.9

30.6

Major PPT

66.6

0.37

0.8

56.9

33.4

Minor 5ss

20.7

-3.4

3.8

30.2

Minor BPS

48.7

-0.1

1.7

54.17

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018773

Chromosome:

PEDO01006104.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032084

193 - 3823

3631