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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006123.1_2951_3309_F

Intron Information:

Intron Rank:

142214

Intron Class:

major

Intron Phase:

Intron Coordinates:

2951 - 3309

Intron Length:

359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCATAAA

5'SS Class:

major

3'SS Sequence:

TTCCATTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTCCATTTTATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.8

0.33

1.3

67.6

39.3

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

80.9

0.7

0.8

32.3

Minor 5ss

28.7

-2.4

2.8

33.8

41.5

Minor BPS

48.2

-0.1

1.8

61.22

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026585

Chromosome:

PEDO01006123.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041098

21 - 3953

3933