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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006160.1_1455_1537_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1455 - 1537

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCGTG

5'SS Class:

major

3'SS Sequence:

CTCTCTTCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCCCAT

U12 Branch Point Sequence:

CTCTCTTCTACA

Flanking Amino Acid:

RGWDENVYYTVPLIRTMESR

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

63.1

43.4

Major BPS

50.9

0.02

1.3

60.4

37.5

Major PPT

84.9

0.78

0.7

79.4

26.2

Minor 5ss

34.1

-1.8

3.4

38.1

46.8

Minor BPS

49.9

-0

1.9

43.4

Associated Gene:

Gene:

NIPSNAP1

Ensembl Gene ID:

ENSAPLG00000019733

Chromosome:

PEDO01006160.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042034

1390 - 3070

1681