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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006160.1_1622_1750_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1622 - 1750

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGCGGG

5'SS Class:

major

3'SS Sequence:

CTCCTCCCGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTACAA

U12 Branch Point Sequence:

TTACGGTGGATT

Flanking Amino Acid:

GELYVVHHLWAYKDLQSREE

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

47.1

Major BPS

46.3

-0.2

1.3

52.7

43.2

Major PPT

69.4

0.44

0.9

65.4

30.5

Minor 5ss

35.3

-1.7

3.3

38.2

46.7

Minor BPS

40.6

-0.6

2.4

61.8

42.4

Associated Gene:

Gene:

NIPSNAP1

Ensembl Gene ID:

ENSAPLG00000019733

Chromosome:

PEDO01006160.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042034

1390 - 3070

1681