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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006160.1_1846_1949_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1846 - 1949

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCGG

5'SS Class:

major

3'SS Sequence:

CCCCCGTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCGAC

U12 Branch Point Sequence:

CTCGTGCGACCC

Flanking Amino Acid:

PGTMIEWGNNWARAIKYRQE

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

61.4

44.7

Major BPS

42.5

-0.4

1.4

35.6

42.9

Major PPT

63.6

0.31

38.8

Minor 5ss

28.3

-2.5

2.7

29.1

Minor BPS

31.5

-1.4

2.2

38.29

40.6

Associated Gene:

Gene:

NIPSNAP1

Ensembl Gene ID:

ENSAPLG00000019733

Chromosome:

PEDO01006160.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042034

1390 - 3070

1681