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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006160.1_2240_2334_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2240 - 2334

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCGCCC

5'SS Class:

major

3'SS Sequence:

TGGCTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCAGCAG

U12 Branch Point Sequence:

GCGGCAGCAGCT

Flanking Amino Acid:

DCMNKLKQNKEYLDFRKERS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.3

55.8

40.2

Major BPS

33.8

-1

1.5

33.4

42.7

Major PPT

67.2

0.39

57.7

43.2

Minor 5ss

36.2

-1.6

3.5

51.2

45.5

Minor BPS

33.4

-1.1

2.3

45.76

45.4

Associated Gene:

Gene:

NIPSNAP1

Ensembl Gene ID:

ENSAPLG00000019733

Chromosome:

PEDO01006160.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042034

1390 - 3070

1681