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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006174.1_5514_6523_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5514 - 6523

Intron Length:

1010

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TGTATTGTGATT

Flanking Amino Acid:

FGLILDDVSLTHLTFGKEFT

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

78.7

35.3

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

82.1

0.72

0.8

73.6

37.1

Minor 5ss

35.3

-1.7

3.8

52.2

Minor BPS

46.8

-0.1

67.18

38.3

Associated Gene:

Gene:

PHB

Ensembl Gene ID:

ENSAPLG00000011978

Chromosome:

PEDO01006174.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045229

4188 - 9342

5155

ENSAPLT00000012476

4047 - 8774

4728