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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006174.1_7567_8080_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7567 - 8080

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAA

U12 Branch Point Sequence:

TGCAGCTAAACT

Flanking Amino Acid:

RNIPVITGSKDLQNVNITLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

61.3

0.28

1.1

61.7

34.1

Major PPT

82.1

0.72

0.9

73.7

41.6

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

48.9

-0

2.1

69.13

47.3

Associated Gene:

Gene:

PHB

Ensembl Gene ID:

ENSAPLG00000011978

Chromosome:

PEDO01006174.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045229

4188 - 9342

5155

ENSAPLT00000012476

4047 - 8774

4728