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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006191.1_14709_15036_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
14709 - 15036

Intron Length:
328

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTACGTCCG

5'SS Class:
major

3'SS Sequence:
CGTGTCCTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTGGCAC

U12 Branch Point Sequence:
CGAGCTGCGAGC

Flanking Amino Acid:
LQQDADKSCMEVTGYQTKPW

Intron Amino Acid Position:
102

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1.1
59.1
45.4

Major BPS
43
-0.4
1.5
48.8
46.3

Major PPT
75.9
0.58
0.9
65.7
41

Minor 5ss
33.6
-1.9
3
39
41.3

Minor BPS
32.9
-1.3
2.1
34.27
35.5

Associated Gene:

Gene:
ATP13A2

Ensembl Gene ID:

Chromosome:
PEDO01006191.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10836 - 24269
13434

10836 - 24269
13434