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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006191.1_18662_18751_F


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
18662 - 18751

Intron Length:
90

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTAGGGAGG

5'SS Class:
major

3'SS Sequence:
TTCTCCCGCACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTAAC

U12 Branch Point Sequence:
TTCTCCCGCACA

Flanking Amino Acid:
VKFVLFLAVLAFIGTLYSIL

Intron Amino Acid Position:
496

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69
0.45
1.2
55.2
49

Major BPS
74.5
0.61
1.1
75.6
36.6

Major PPT
73.5
0.53
0.9
68.4
32

Minor 5ss
29.8
-2.3
3.3
30.4
43.1

Minor BPS
48.4
-0.1
2.2
68.97
43.1

Associated Gene:

Gene:
ATP13A2

Ensembl Gene ID:

Chromosome:
PEDO01006191.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10836 - 24269
13434

10836 - 24269
13434