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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006192.1_4254_4927_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4254 - 4927

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

CATTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTACCCTCATT

Flanking Amino Acid:

ETEESLETLRAAVAASDLNS

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.1

38.4

Major BPS

0.62

1.4

85.7

34.9

Major PPT

83.2

0.75

0.8

77.4

30.9

Minor 5ss

31.9

-2.1

2.9

32.9

41.9

Minor BPS

0.24

2.1

81.49

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026048

Chromosome:

PEDO01006192.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038320

1144 - 21637

20494