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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006194.1_185_357_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
185 - 357

Intron Length:
173

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACGGCA

5'SS Class:
major

3'SS Sequence:
CCCCTCGCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGGTGAC

U12 Branch Point Sequence:
TGGTGGTGACCC

Flanking Amino Acid:
DTADYVTPPQGTSVFVVVTR

Intron Amino Acid Position:
43

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.7
0.61
1.2
66.7
39.1

Major BPS
56.2
0.15
1.3
48.8
46.3

Major PPT
65.9
0.36
0.9
56.6
33.5

Minor 5ss
35
-1.7
3.5
47.9
47.8

Minor BPS
38.7
-0.8
2.5
51.46
45.5

Associated Gene:

Gene:
P2RX3

Ensembl Gene ID:

Chromosome:
PEDO01006194.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

53 - 1980
1928

27 - 2171
2145

101 - 2380
2280

27 - 1980
1954