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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006197.1_1994_2946_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1994 - 2946

Intron Length:

953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CCCTTCCCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAG

U12 Branch Point Sequence:

ACAGCCCGAACT

Flanking Amino Acid:

FIALLLRFDISLKKNTHTYF

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

0.1

1.4

61.7

34.1

Major PPT

78.2

0.63

0.7

69.1

31.5

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

48.1

-0

1.9

65.12

44.7

Associated Gene:

Gene:

HM13

Ensembl Gene ID:

ENSAPLG00000014289

Chromosome:

PEDO01006197.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037889

21 - 6894

6874