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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006197.1_2046_3282_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2046 - 3282

Intron Length:

1237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACA

5'SS Class:

strong_major

3'SS Sequence:

AGCTCATTTTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

GCCAGCTCATTT

Flanking Amino Acid:

MLGLGDIVIPATGIPQPELS

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

77.5

32.3

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

52.3

0.05

1.7

62.4

42.9

Minor 5ss

27.1

-2.6

2.9

31.6

42.4

Minor BPS

39.5

-0.7

49.12

44.5

Associated Gene:

Gene:

HM13

Ensembl Gene ID:

ENSAPLG00000014289

Chromosome:

PEDO01006197.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040902

205 - 6685

6481

ENSAPLT00000025558

758 - 6870

6113

ENSAPLT00000014908

303 - 6685

6383