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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006197.1_275_1085_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

275 - 1085

Intron Length:

811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTCATCTG

5'SS Class:

major

3'SS Sequence:

ATCTCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

CGTGCTTTGATG

Flanking Amino Acid:

VPTPGHSWRDRHRVSWARPS

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.3

0.31

1.3

58.3

46.1

Major BPS

0.85

0.9

39.9

Major PPT

75.9

0.58

0.9

69.6

36.1

Minor 5ss

32.5

-2

3.1

41.8

44.7

Minor BPS

52.9

-0

1.5

54.17

41.9

Associated Gene:

Gene:

HM13

Ensembl Gene ID:

ENSAPLG00000014289

Chromosome:

PEDO01006197.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040902

205 - 6685

6481