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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006197.1_2984_3282_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2984 - 3282

Intron Length:

299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTCCAT

U12 Branch Point Sequence:

TCTGCCTCCATC

Flanking Amino Acid:

MLGLGDIVIPGIFIALLLRF

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

77.5

32.3

Major BPS

52.4

0.06

1.3

41.7

Major PPT

83.3

0.75

0.7

77.4

24.5

Minor 5ss

27.1

-2.6

2.9

31.6

42.4

Minor BPS

48.2

-0.1

2.1

61.86

44.3

Associated Gene:

Gene:

HM13

Ensembl Gene ID:

ENSAPLG00000014289

Chromosome:

PEDO01006197.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037889

21 - 6894

6874