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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006197.1_3715_5262_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3715 - 5262

Intron Length:

1548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAACGGG

5'SS Class:

major

3'SS Sequence:

TGCTCGCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CCGTCCTCACCC

Flanking Amino Acid:

GGLFIYDVFWVFGTNVMVTV

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.1

51.3

45.9

Major BPS

72.4

0.56

73.5

32.5

Major PPT

63.7

0.31

0.9

54.6

36.6

Minor 5ss

34.6

-1.7

3.4

37.8

47.1

Minor BPS

49.4

-0

1.9

57.89

Associated Gene:

Gene:

HM13

Ensembl Gene ID:

ENSAPLG00000014289

Chromosome:

PEDO01006197.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025558

758 - 6870

6113

ENSAPLT00000014908

303 - 6685

6383

ENSAPLT00000040902

205 - 6685

6481

ENSAPLT00000037889

21 - 6894

6874