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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006197.1_474_1171_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

474 - 1171

Intron Length:

698

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCG|GCAGGGGTC

5'SS Class:

major

3'SS Sequence:

GGGCCAGCTCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAGCCAG

U12 Branch Point Sequence:

TGGGGGCCAGCT

Flanking Amino Acid:

EVTEMFRWASPPACPGGEGK

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.2

75.5

34.4

Major BPS

37.4

-0.7

1.5

39.5

40.8

Major PPT

55.9

0.13

1.1

43.5

42.5

Minor 5ss

22.5

-3.2

4.5

40.4

46.2

Minor BPS

28.8

-1.5

2.4

45.29

45.6

Associated Gene:

Gene:

HM13

Ensembl Gene ID:

ENSAPLG00000014289

Chromosome:

PEDO01006197.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014908

303 - 6685

6383