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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006197.1_5389_5491_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5389 - 5491

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

GTGTCCTCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACCCAC

U12 Branch Point Sequence:

GGGGACCCACCT

Flanking Amino Acid:

VVGVWYLLRKHWIANNLFGL

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

71.2

34.6

Major BPS

44.8

-0.3

1.3

50.1

36.7

Major PPT

73.1

0.52

0.9

69.9

36.6

Minor 5ss

24.3

-3

3.1

28.4

43.8

Minor BPS

35.6

-1

47.62

44.1

Associated Gene:

Gene:

HM13

Ensembl Gene ID:

ENSAPLG00000014289

Chromosome:

PEDO01006197.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037889

21 - 6894

6874

ENSAPLT00000025558

758 - 6870

6113

ENSAPLT00000014908

303 - 6685

6383

ENSAPLT00000040902

205 - 6685

6481