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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006197.1_6276_6733_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6276 - 6733

Intron Length:

458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAACCGAA

5'SS Class:

weak_major

3'SS Sequence:

TTTCTTTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGCAA

U12 Branch Point Sequence:

TTCTCTGCAACC

Flanking Amino Acid:

SSLPAALGLFHPMMNRFFPA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.5

0.15

1.2

53.5

Major BPS

53.2

0.08

1.4

65.6

41.4

Major PPT

90.1

0.9

0.6

84.1

30.8

Minor 5ss

43.4

-0.7

3.3

60.4

45.5

Minor BPS

51.4

0.02

2.2

70.01

41.9

Associated Gene:

Gene:

HM13

Ensembl Gene ID:

ENSAPLG00000014289

Chromosome:

PEDO01006197.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025558

758 - 6870

6113