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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006197.1_6323_6553_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6323 - 6553

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCTGGGATC

5'SS Class:

major

3'SS Sequence:

GGGGTTTCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGGAG

U12 Branch Point Sequence:

GTGCTGGGCAGT

Flanking Amino Acid:

FWGHSASPIRNCPSLQPFFF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.7

0.28

1.4

68.5

39.6

Major BPS

-0.4

1.8

42.8

49.4

Major PPT

65.3

0.34

58.5

Minor 5ss

-3.3

3.9

26.6

36.7

Minor BPS

26.2

-1.7

2.5

41.75

41.2

Associated Gene:

Gene:

HM13

Ensembl Gene ID:

ENSAPLG00000014289

Chromosome:

PEDO01006197.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040902

205 - 6685

6481

ENSAPLT00000014908

303 - 6685

6383