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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006204.1_107066_119252_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107066 - 119252

Intron Length:

12187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGCATGCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAA

U12 Branch Point Sequence:

TGCTTTGGAACT

Flanking Amino Acid:

SGGNTVESVTGQRLLGSSAP

Intron Amino Acid Position:

503

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.7

90.9

28.7

Major BPS

62.2

0.3

1.4

63.4

44.3

Major PPT

60.1

0.23

54.1

40.6

Minor 5ss

40.2

-1.1

3.1

58.6

45.9

Minor BPS

47.7

-0

2.1

68.54

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016186

Chromosome:

PEDO01006204.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034262

76687 - 124840

48154

ENSAPLT00000026935

76687 - 123444

46758

ENSAPLT00000016894

75149 - 123432

48284

ENSAPLT00000037300

76687 - 125317

48631