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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006204.1_12914_23629_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12914 - 23629

Intron Length:

10716

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAAAA

5'SS Class:

major

3'SS Sequence:

TTCTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTATATGGAAAT

Flanking Amino Acid:

TMSDGWKFEQLVSIGSSYNY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.1

76.9

33.7

Major BPS

79.2

0.73

75.3

39.4

Major PPT

91.7

0.94

0.5

92.2

18.3

Minor 5ss

38.3

-1.3

2.9

48.8

46.9

Minor BPS

44.2

-0.3

2.2

68.15

42.1

Associated Gene:

Gene:

KCTD5

Ensembl Gene ID:

ENSAPLG00000001530

Chromosome:

PEDO01006204.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019268

10581 - 23767

13187